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  5. Cba_g02060

Cba_g02060 (HYP1, ATHYP1)


Aliases : HYP1, ATHYP1

Description : calcium-permeable channel *(OSCA) & original description: none


Gene families : OG0000264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g02060
Cluster HCCA: Cluster_284

Target Alias Description ECC score Gene Family Method Actions
AT4G02900 No alias ERD (early-responsive to dehydration stress) family protein 0.03 OrthoFinder output from all 47 species
Ala_g16435 HYP1, ATHYP1 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020816.39 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre08.g360600 No alias Solute transport.channels.OSCA calcium-permeable channel 0.01 OrthoFinder output from all 47 species
Ehy_g02886 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012117_P001 RXW8, Zm00001e012117 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
InterPro domains Description Start Stop
IPR003864 CSC1/OSCA1-like_7TM 363 627
IPR032880 Csc1/OSCA1-like_N 10 169
IPR027815 CSC1/OSCA1-like_cyt 192 349
No external refs found!