Cpa|evm.model.tig00021433.2


Description : DNA topoisomerase 2 OS=Arabidopsis thaliana


Gene families : OG_01_0003355 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003355_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021433.2
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00101630 evm_27.TU.AmTr_v1... Cell cycle.interphase.DNA replication.preinitiation.TOP2... 0.04 Archaeplastida
AT3G23890 TOPII, ATTOPII topoisomerase II 0.04 Archaeplastida
Cre01.g009250 No alias Cell cycle.interphase.DNA replication.preinitiation.TOP2... 0.02 Archaeplastida
GSVIVT01032138001 No alias Cell cycle.interphase.DNA replication.preinitiation.TOP2... 0.04 Archaeplastida
Gb_11673 No alias DNA topoisomerase (TOP2) 0.03 Archaeplastida
Gb_12824 No alias DNA topoisomerase 2 OS=Pisum sativum (sp|o24308|top2_pea : 112.0) 0.03 Archaeplastida
LOC_Os02g47150.1 No alias DNA topoisomerase (TOP2) 0.03 Archaeplastida
MA_133272g0010 No alias DNA topoisomerase (TOP2) 0.04 Archaeplastida
MA_6634g0010 No alias DNA topoisomerase (TOP2) 0.03 Archaeplastida
Mp3g13420.1 No alias DNA topoisomerase (TOP2) 0.01 Archaeplastida
Pp3c18_20260V3.1 No alias topoisomerase II 0.03 Archaeplastida
Pp3c19_3610V3.1 No alias topoisomerase II 0.04 Archaeplastida
Smo127267 No alias Cell cycle.interphase.DNA replication.preinitiation.TOP2... 0.03 Archaeplastida
Smo98330 No alias Cell cycle.interphase.DNA replication.preinitiation.TOP2... 0.03 Archaeplastida
Solyc01g087500.3.1 No alias DNA topoisomerase (TOP2) 0.03 Archaeplastida
Zm00001e015542_P001 No alias DNA topoisomerase (TOP2) 0.03 Archaeplastida
Zm00001e023296_P001 No alias DNA topoisomerase (TOP2) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006265 DNA topological change IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003594 HATPase_C 411 503
IPR013506 Topo_IIA_bsu_dom2 593 685
No external refs found!