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  5. Cba_g01949

Cba_g01949


Description : not classified & original description: none


Gene families : OG0000530 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000530_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g01949
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AT3G62630 No alias Protein of unknown function (DUF1645) 0.05 OrthoFinder output from all 47 species
Aev_g03170 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15290 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g40052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g50838 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene42341.t1 Aspi01Gene42341 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42344.t1 Aspi01Gene42344 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42346.t1 Aspi01Gene42346 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64192.t1 Aspi01Gene64192 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G081200.1 Ceric.14G081200 not classified & original description: pacid=50633525... 0.07 OrthoFinder output from all 47 species
Ceric.36G035300.1 Ceric.36G035300 not classified & original description: pacid=50568281... 0.05 OrthoFinder output from all 47 species
Dac_g00887 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g01558 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g14817 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g04047 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g16573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15680 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26826 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os03g19090.1 LOC_Os03g19090 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g44920.1 LOC_Os11g44920 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g07776 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp6g00990.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g08990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g13682 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g51013 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g08659 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0176.g024598 No alias not classified & original description: CDS=1-1863 0.04 OrthoFinder output from all 47 species
Spa_g33678 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12288 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002860_P001 Zm00001e002860 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e021027_P001 Zm00001e021027 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR012442 DUF1645_plant 141 518
No external refs found!