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  5. Cba_g01790

Cba_g01790 (SKIP1)


Aliases : SKIP1

Description : substrate adaptor of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0000527 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000527_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g01790

Target Alias Description ECC score Gene Family Method Actions
AT4G05470 No alias RNI-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G08980 FBW2 F-BOX WITH WD-40 2 0.03 OrthoFinder output from all 47 species
Aev_g04631 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aob_g00933 No alias substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.01 OrthoFinder output from all 47 species
Ceric.09G079900.1 SKIP1, Ceric.09G079900 substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.04 OrthoFinder output from all 47 species
Mp3g07000.1 No alias component F-box of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Ore_g05173 No alias substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pir_g18715 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Solyc11g009050.3.1 FBW2, Solyc11g009050 component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 7 48
IPR001611 Leu-rich_rpt 210 230
No external refs found!