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  5. Cba_g01355

Cba_g01355 (DCL1, CAF, EMB76,...)


Aliases : DCL1, CAF, EMB76, SIN1, ATDCL1, EMB60, SUS1, ASU1

Description : endoribonuclease (DCL2) of transacting siRNA pathway & original description: none


Gene families : OG0000378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000378_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g01355

Target Alias Description ECC score Gene Family Method Actions
Ceric.14G005300.1 DCL1, CAF,... endoribonuclease (DCL2) of transacting siRNA pathway &... 0.05 OrthoFinder output from all 47 species
Cre02.g141000 DCL1, CAF,... Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ore_g37606 ATDCL3, DCL3 endoribonuclease (DCL2) of transacting siRNA pathway &... 0.02 OrthoFinder output from all 47 species
Pnu_g32560 DCL4, ATDCL4 endoribonuclease (DCL2) of transacting siRNA pathway &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008352 ATDCL3, DCL3 endoribonuclease (DCL2) of transacting siRNA pathway &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003100 PAZ_dom 955 1085
IPR001650 Helicase_C 438 555
IPR000999 RNase_III_dom 1343 1456
IPR000999 RNase_III_dom 1128 1264
IPR011545 DEAD/DEAH_box_helicase_dom 84 246
No external refs found!