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Aliases : EMB976
Description : plastidial splicing factor *(PDM4) & original description: none
Gene families : OG0007469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007469_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00048p00132600 | EMB976,... | Pentatricopeptide repeat-containing protein At5g27270... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g059643 | EMB976 | plastidial splicing factor *(PDM4) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g07260 | No alias | plastidial splicing factor *(PDM4) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g13289 | EMB976 | plastidial splicing factor *(PDM4) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene25909.t1 | EMB976, Aspi01Gene25909 | plastidial splicing factor *(PDM4) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Gb_15749 | EMB976 | Pentatricopeptide repeat-containing protein At5g27270... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g10450 | EMB976 | plastidial splicing factor *(PDM4) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g41040 | EMB976 | plastidial splicing factor *(PDM4) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g07531 | EMB976 | plastidial splicing factor *(PDM4) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g51412 | No alias | plastidial splicing factor *(PDM4) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo110655 | EMB976 | Pentatricopeptide repeat-containing protein At5g27270... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g01225 | EMB976 | plastidial splicing factor *(PDM4) & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005543 | phospholipid binding | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 336 | 364 |
| IPR002885 | Pentatricopeptide_repeat | 476 | 505 |
| IPR002885 | Pentatricopeptide_repeat | 234 | 259 |
| IPR002885 | Pentatricopeptide_repeat | 451 | 470 |
| IPR002885 | Pentatricopeptide_repeat | 546 | 574 |
| IPR002885 | Pentatricopeptide_repeat | 405 | 435 |
| IPR002885 | Pentatricopeptide_repeat | 197 | 225 |
| IPR002885 | Pentatricopeptide_repeat | 370 | 399 |
| IPR002885 | Pentatricopeptide_repeat | 264 | 308 |
| No external refs found! |