1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g01102

Cba_g01102 (EER5)


Aliases : EER5

Description : component *(PCID2/Thp1) of TREX-2 mRNP trafficking complex & original description: none


Gene families : OG0005947 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005947_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g01102

Target Alias Description ECC score Gene Family Method Actions
Ala_g01995 EER5 component *(PCID2/Thp1) of TREX-2 mRNP trafficking... 0.04 OrthoFinder output from all 47 species
Aop_g02156 EER5 component *(PCID2/Thp1) of TREX-2 mRNP trafficking... 0.02 OrthoFinder output from all 47 species
Azfi_s0168.g054611 EER5 component *(PCID2/Thp1) of TREX-2 mRNP trafficking... 0.03 OrthoFinder output from all 47 species
Ceric.26G036400.1 EER5, Ceric.26G036400 component *(PCID2/Thp1) of TREX-2 mRNP trafficking... 0.02 OrthoFinder output from all 47 species
Dcu_g13120 EER5 component *(PCID2/Thp1) of TREX-2 mRNP trafficking... 0.04 OrthoFinder output from all 47 species
Mp1g04560.1 EER5 component PCID2/Thp1 of TREX-2 mRNP trafficking complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR000717 PCI_dom 285 400
No external refs found!