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  5. Cba_g01069

Cba_g01069


Description : SSU processome assembly factor *(UTP7) & original description: none


Gene families : OG0006880 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006880_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g01069

Target Alias Description ECC score Gene Family Method Actions
Aob_g19923 No alias SSU processome assembly factor *(UTP7) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os01g08770.1 LOC_Os01g08770 SSU processome assembly factor (UTP7) 0.02 OrthoFinder output from all 47 species
Ore_g10628 No alias SSU processome assembly factor *(UTP7) & original... 0.04 OrthoFinder output from all 47 species
Sam_g19216 No alias SSU processome assembly factor *(UTP7) & original... 0.04 OrthoFinder output from all 47 species
Sam_g19217 No alias SSU processome assembly factor *(UTP7) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e030145_P002 Zm00001e030145 SSU processome assembly factor (UTP7) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR012952 BING4_C_dom 342 421
No external refs found!