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  5. Cba_g01052

Cba_g01052


Description : not classified & original description: none


Gene families : OG0001514 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001514_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g01052

Target Alias Description ECC score Gene Family Method Actions
AT3G58520 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.03 OrthoFinder output from all 47 species
AT5G48040 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.03 OrthoFinder output from all 47 species
Ala_g07070 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11058 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Als_g13696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18610 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g25571 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g00927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G075200.1 RPD1, Ceric.16G075200 not classified & original description: pacid=50589258... 0.02 OrthoFinder output from all 47 species
Dac_g00875 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g12385 RPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29304 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os06g15550.1 LOC_Os06g15550 Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Len_g08341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58602 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05427 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g06839 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g07478 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005187 No alias not classified & original description: CDS=1-1266 0.03 OrthoFinder output from all 47 species
Spa_g04531 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g22170 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Zm00001e006573_P002 Zm00001e006573 Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e014695_P001 Zm00001e014695 no description available(sp|q9zuz6|wtf9_arath : 128.0) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR021099 PORR_domain 56 390
No external refs found!