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  5. Cba_g00636

Cba_g00636


Description : E3 ubiquitin ligase *(MEL) & original description: none


Gene families : OG0007227 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007227_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g00636

Target Alias Description ECC score Gene Family Method Actions
Als_g15915 No alias E3 ubiquitin ligase *(MEL) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g28218 No alias E3 ubiquitin ligase *(MEL) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020266 No alias E3 ubiquitin ligase *(MEL) & original description: CDS=1-1059 0.02 OrthoFinder output from all 47 species
Smo132850 No alias No description available 0.03 OrthoFinder output from all 47 species
Smo26026 No alias No description available 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007527 Znf_SWIM 112 142
No external refs found!