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Description : not classified & original description: none
Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cba_g00291 | |
| Cluster | HCCA: Cluster_11 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00264070 | CDF3,... | RNA biosynthesis.transcriptional activation.C2C2... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00058p00210070 | TMO6,... | RNA biosynthesis.transcriptional activation.C2C2... | 0.04 | OrthoFinder output from all 47 species | |
| AT3G21270 | ADOF2, DOF2 | DOF zinc finger protein 2 | 0.02 | OrthoFinder output from all 47 species | |
| AT5G60850 | OBP4 | OBF binding protein 4 | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g024682 | No alias | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g106349 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g17633 | CDF2 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g03761 | TMO6 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g38452 | OBP4 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g11020 | CDF2 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g20563 | ADOF1, DOF1 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene13553.t1 | CDF3, Aspi01Gene13553 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000476 | TMO6 | transcription factor *(DOF) & original description: CDS=1-1320 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s1074.g096912 | TMO6 | transcription factor *(DOF) & original description: CDS=1-1176 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g36947 | OBP3 | transcription factor *(DOF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01005057001 | TMO6 | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01007758001 | HCA2, DOF5.6 | RNA biosynthesis.transcriptional activation.C2C2... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01021085001 | No alias | RNA biosynthesis.transcriptional activation.C2C2... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_07177 | CDF2 | transcription factor (DOF) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g09720.1 | ADOF2, DOF2,... | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g15350.1 | LOC_Os02g15350 | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g47990.1 | LOC_Os04g47990 | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g38220.1 | LOC_Os08g38220 | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g29714 | CDF2 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g18540.1 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g32354 | TMO6 | transcription factor *(DOF) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g03743 | ADOF1, DOF1 | transcription factor *(DOF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g61204 | OBP4 | transcription factor *(DOF) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0040.g012351 | ADOF1, DOF1 | transcription factor *(DOF) & original description: CDS=1-1632 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0047.g013517 | CDF3 | transcription factor *(DOF) & original description: CDS=154-1659 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g43145 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g077950.3.1 | Solyc02g077950 | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g077960.3.1 | TMO6, Solyc02g077960 | transcription factor (DOF) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g090220.3.1 | OBP1, Solyc02g090220 | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g090310.1.1 | ADOF2, DOF2,... | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g082840.3.1 | DAG1, Solyc03g082840 | transcription factor (DOF) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g054510.2.1 | OBP3, Solyc05g054510 | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g076030.3.1 | Solyc06g076030 | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g009360.4.1 | DAG1, Solyc10g009360 | transcription factor (DOF) | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g28492 | CDF2 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e001988_P001 | TMO6, Zm00001e001988 | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e007228_P002 | Zm00001e007228 | transcription factor (DOF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e010454_P001 | TMO6, Zm00001e010454 | transcription factor (DOF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e011750_P002 | Zm00001e011750 | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015414_P004 | Zm00001e015414 | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015597_P001 | HCA2, DOF5.6,... | transcription factor (DOF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e017319_P001 | CDF2, Zm00001e017319 | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e019172_P001 | Zm00001e019172 | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e027634_P002 | OBP3, Zm00001e027634 | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e028042_P002 | Zm00001e028042 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e031750_P001 | Zm00001e031750 | transcription factor (DOF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e035074_P001 | TMO6, Zm00001e035074 | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003849 | 3-deoxy-7-phosphoheptulonate synthase activity | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0009072 | aromatic amino acid metabolic process | IEP | HCCA |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
| MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |