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  5. Sam_g52944

Sam_g52944


Description : RALF/RALFL precursor polypeptide & original description: none


Gene families : OG0000846 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000846_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g52944

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00262240 RALFL22,... Phytohormones.signalling peptides.CRP... 0.05 OrthoFinder output from all 47 species
AMTR_s00022p00078480 RALFL19,... Phytohormones.signalling peptides.CRP... 0.03 OrthoFinder output from all 47 species
AMTR_s00044p00139580 RALF23,... Phytohormones.signalling peptides.CRP... 0.04 OrthoFinder output from all 47 species
AT1G02900 RALF1, ATRALF1, RALFL1 rapid alkalinization factor 1 0.02 OrthoFinder output from all 47 species
AT3G16570 RALF23, ATRALF23 rapid alkalinization factor 23 0.03 OrthoFinder output from all 47 species
Adi_g046497 RALFL19 RALF/RALFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18465 No alias RALF/RALFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11578 RALFL34 RALF/RALFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11425 No alias RALF/RALFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18973 No alias RALF/RALFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25497.t1 RALFL24, Aspi01Gene25497 RALF/RALFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34811 RALFL33 RALF/RALFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.27G037500.1 RALFL33, Ceric.27G037500 RALF/RALFL precursor polypeptide & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.27G044900.1 Ceric.27G044900 RALF/RALFL precursor polypeptide & original description:... 0.02 OrthoFinder output from all 47 species
Dde_g29577 No alias RALF/RALFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00210 RALFL34 RALF/RALFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01746 RALFL34 RALF/RALFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01027973001 No alias Phytohormones.signalling peptides.CRP... 0.03 OrthoFinder output from all 47 species
LOC_Os01g25560.1 RALFL33, LOC_Os01g25560 RALF/RALFL precursor polypeptide 0.02 OrthoFinder output from all 47 species
LOC_Os03g22440.1 RALFL33, LOC_Os03g22440 RALF/RALFL precursor polypeptide 0.03 OrthoFinder output from all 47 species
LOC_Os04g54090.1 LOC_Os04g54090 RALF/RALFL precursor polypeptide 0.02 OrthoFinder output from all 47 species
LOC_Os10g18170.1 LOC_Os10g18170 RALF/RALFL precursor polypeptide 0.05 OrthoFinder output from all 47 species
LOC_Os11g26880.1 RALF23,... RALF/RALFL precursor polypeptide 0.07 OrthoFinder output from all 47 species
LOC_Os12g35690.1 RALFL22, LOC_Os12g35690 RALF/RALFL precursor polypeptide 0.02 OrthoFinder output from all 47 species
MA_446492g0010 No alias RALF/RALFL precursor polypeptide 0.02 OrthoFinder output from all 47 species
MA_52559g0010 No alias RALF/RALFL precursor polypeptide 0.03 OrthoFinder output from all 47 species
Mp1g27120.1 RALFL34 RALF/RALFL precursor polypeptide 0.02 OrthoFinder output from all 47 species
Msp_g30328 No alias RALF/RALFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32874 RALFL33 RALF/RALFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52922 RALFL33 RALF/RALFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007304 RALFL34 RALF/RALFL precursor polypeptide & original description:... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012435 RALFL19 RALF/RALFL precursor polypeptide & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018220 RALFL19 RALF/RALFL precursor polypeptide & original description:... 0.02 OrthoFinder output from all 47 species
Solyc01g099520.3.1 RALFL33, Solyc01g099520 RALF/RALFL precursor polypeptide 0.03 OrthoFinder output from all 47 species
Spa_g05711 RALFL33 RALF/RALFL precursor polypeptide & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g00063 No alias RALF/RALFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e039701_P001 RALFL33, Zm00001e039701 RALF/RALFL precursor polypeptide 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR008801 RALF 130 165
No external refs found!