Sam_g52915

Description : component *(eS30) of small ribosomal-subunit (SSU) proteome & original description: none

Gene families : OG0002477 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002477_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g52915
Cluster	HCCA: Cluster_28

Target	Alias	Description	ECC score	Gene Family Method
Adi_g127141	No alias	component *(eS30) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Aop_g34461	No alias	component *(eS30) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
Azfi_s0068.g036442	No alias	component *(eS30) of small ribosomal-subunit (SSU)...	0.09	OrthoFinder output from all 47 species
Ceric.05G056700.1	Ceric.05G056700	component *(eS30) of small ribosomal-subunit (SSU)...	0.06	OrthoFinder output from all 47 species
Ceric.20G020400.1	Ceric.20G020400	component *(eS30) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001003.33	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.08	OrthoFinder output from all 47 species
Cre16.g666301	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.12	OrthoFinder output from all 47 species
Dcu_g18710	No alias	component *(eS30) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Dcu_g30830	No alias	component *(eS30) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Gb_16784	No alias	component RPS30 of SSU proteome	0.02	OrthoFinder output from all 47 species
Gb_23464	No alias	component RPS30 of SSU proteome	0.07	OrthoFinder output from all 47 species
Lfl_g31880	No alias	component *(eS30) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
MA_10432727g0010	No alias	component RPS30 of SSU proteome	0.03	OrthoFinder output from all 47 species
Mp2g24290.1	No alias	component RPS30 of SSU proteome	0.13	OrthoFinder output from all 47 species
Mp8g09080.1	No alias	component RPS30 of SSU proteome	0.08	OrthoFinder output from all 47 species
Nbi_g43255	No alias	component *(eS30) of small ribosomal-subunit (SSU)...	0.05	OrthoFinder output from all 47 species
Pp3c1_420V3.1	Pp3c1_420	Ribosomal protein S30 family protein	0.05	OrthoFinder output from all 47 species
Pp3c2_29010V3.1	Pp3c2_29010	Ribosomal protein S30 family protein	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0211.g025924	No alias	component *(eS30) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Sam_g35687	No alias	component *(eS30) of small ribosomal-subunit (SSU)...	0.05	OrthoFinder output from all 47 species
Sam_g37139	No alias	component *(eS30) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Spa_g36758	No alias	component *(eS30) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
Spa_g45532	No alias	component *(eS30) of small ribosomal-subunit (SSU)...	0.07	OrthoFinder output from all 47 species

GO:0043170

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005261	monoatomic cation channel activity	IEP	HCCA
BP	GO:0006414	translational elongation	IEP	HCCA
BP	GO:0006417	regulation of translation	IEP	HCCA
BP	GO:0006448	regulation of translational elongation	IEP	HCCA
BP	GO:0006449	regulation of translational termination	IEP	HCCA
BP	GO:0006754	ATP biosynthetic process	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009891	positive regulation of biosynthetic process	IEP	HCCA
BP	GO:0009893	positive regulation of metabolic process	IEP	HCCA
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	HCCA
BP	GO:0010628	positive regulation of gene expression	IEP	HCCA
MF	GO:0015252	proton channel activity	IEP	HCCA
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	HCCA
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0034248	regulation of amide metabolic process	IEP	HCCA
BP	GO:0034250	positive regulation of amide metabolic process	IEP	HCCA
MF	GO:0043021	ribonucleoprotein complex binding	IEP	HCCA
MF	GO:0043022	ribosome binding	IEP	HCCA
BP	GO:0043243	positive regulation of protein-containing complex disassembly	IEP	HCCA
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
BP	GO:0045727	positive regulation of translation	IEP	HCCA
BP	GO:0045901	positive regulation of translational elongation	IEP	HCCA
BP	GO:0045905	positive regulation of translational termination	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
BP	GO:0048522	positive regulation of cellular process	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
BP	GO:0051130	positive regulation of cellular component organization	IEP	HCCA
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051246	regulation of protein metabolic process	IEP	HCCA
BP	GO:0051247	positive regulation of protein metabolic process	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006846	Ribosomal_S30	73	119

External Links

No external refs found!

Sam_g52915

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation