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  5. Sam_g52634

Sam_g52634


Description : GTPase effector *(RIC) & original description: none


Gene families : OG0003333 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003333_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g52634

Target Alias Description ECC score Gene Family Method Actions
AT1G61795 No alias PAK-box/P21-Rho-binding family protein 0.02 OrthoFinder output from all 47 species
Aop_g08010 No alias GTPase effector *(RIC) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G020900.1 RIC7, Ceric.07G020900 GTPase effector *(RIC) & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g13669 No alias GTPase effector *(RIC) & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01012640001 RIC10 Multi-process regulation.Rop GTPase regulatory... 0.02 OrthoFinder output from all 47 species
LOC_Os02g06660.1 RIC10, LOC_Os02g06660 GTPase effector (RIC) 0.02 OrthoFinder output from all 47 species
LOC_Os04g53580.1 RIC10, LOC_Os04g53580 GTPase effector (RIC) 0.05 OrthoFinder output from all 47 species
LOC_Os06g46754.1 RIC10, LOC_Os06g46754 GTPase effector (RIC) 0.04 OrthoFinder output from all 47 species
Lfl_g09669 RIC7 GTPase effector *(RIC) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26563 RIC7 GTPase effector *(RIC) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04739 No alias GTPase effector *(RIC) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g42422 RIC7 GTPase effector *(RIC) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008373 sialyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR000095 CRIB_dom 224 246
No external refs found!