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  5. Sam_g52608

Sam_g52608


Description : not classified & original description: none


Gene families : OG0000743 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000743_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g52608

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00079860 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin... 0.02 OrthoFinder output from all 47 species
AMTR_s00058p00080420 evm_27.TU.AmTr_v1... Formin-like protein 20 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g063475 AFH14 group-II formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Adi_g086667 No alias group-II formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Ala_g26800 AFH14 group-II formin actin filament elongation factor &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene34945.t1 AFH14, Aspi01Gene34945 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34946.t1 AFH14, Aspi01Gene34946 group-II formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Dcu_g35900 AFH14 group-II formin actin filament elongation factor &... 0.05 OrthoFinder output from all 47 species
Dcu_g43328 AFH14 group-II formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
GSVIVT01007958001 No alias Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
LOC_Os07g40520.1 LOC_Os07g40520 Formin-like protein 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Lfl_g07846 AFH14 group-II formin actin filament elongation factor &... 0.04 OrthoFinder output from all 47 species
MA_4962g0010 No alias Formin-like protein 6 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Msp_g48707 AFH14 group-II formin actin filament elongation factor &... 0.04 OrthoFinder output from all 47 species
Ppi_g56726 AFH14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e004057_P003 AFH14, Zm00001e004057 group-II formin actin filament elongation factor 0.05 OrthoFinder output from all 47 species
Zm00001e016114_P001 Zm00001e016114 group-II formin actin filament elongation factor 0.03 OrthoFinder output from all 47 species
Zm00001e035462_P001 Zm00001e035462 group-II formin actin filament elongation factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006012 galactose metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008108 UDP-glucose:hexose-1-phosphate uridylyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR014020 Tensin_C2-dom 199 336
No external refs found!