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  5. Sam_g52497

Sam_g52497


Description : solute transporter *(TPPT) & original description: none


Gene families : OG0001477 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001477_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g52497

Target Alias Description ECC score Gene Family Method Actions
AT3G59340 No alias Eukaryotic protein of unknown function (DUF914) 0.02 OrthoFinder output from all 47 species
Aob_g32388 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g74979 No alias solute transporter *(TPPT) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G087500.1 Ceric.11G087500 solute transporter *(TPPT) & original description:... 0.08 OrthoFinder output from all 47 species
Ceric.30G066800.1 Ceric.30G066800 solute transporter *(TPPT) & original description:... 0.02 OrthoFinder output from all 47 species
Cre09.g406350 No alias Solute transport.carrier-mediated transport.DMT... 0.02 OrthoFinder output from all 47 species
MA_780508g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g09275 No alias solute transporter *(TPPT) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19500 No alias solute transporter *(TPPT) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57610 No alias solute transporter *(TPPT) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0202.g025640 No alias not classified & original description: CDS=1168-1596 0.06 OrthoFinder output from all 47 species
Sam_g19931 No alias solute transporter *(TPPT) & original description: none 0.02 OrthoFinder output from all 47 species
Smo402781 No alias Solute transport.carrier-mediated transport.DMT... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR009262 SLC35_F1/F2/F6 8 296
No external refs found!