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  5. Lfl_g30596

Lfl_g30596


Description : plastidial ribosome hibernation-promoting factor *(PSRP1) & original description: none


Gene families : OG0004521 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004521_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g30596

Target Alias Description ECC score Gene Family Method Actions
Cba_g08190 No alias plastidial ribosome hibernation-promoting factor... 0.03 OrthoFinder output from all 47 species
Ehy_g01192 No alias plastidial ribosome hibernation-promoting factor... 0.03 OrthoFinder output from all 47 species
Gb_00693 No alias plastidial ribosome hibernation-promoting factor (PSRP1) 0.03 OrthoFinder output from all 47 species
Ppi_g06824 No alias plastidial ribosome hibernation-promoting factor... 0.03 OrthoFinder output from all 47 species
Solyc06g073090.3.1 Solyc06g073090 plastidial ribosome hibernation-promoting factor (PSRP1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0044238 primary metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR003489 RHF/RaiA 125 221
IPR032528 Ribosom_S30AE_C 254 308
No external refs found!