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  5. Sam_g52286

Sam_g52286


Description : ubiquitin-proteasome shuttle factor *(DSK2) & original description: none


Gene families : OG0001912 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001912_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g52286

Target Alias Description ECC score Gene Family Method Actions
AT2G17190 No alias ubiquitin family protein 0.03 OrthoFinder output from all 47 species
AT2G17200 DSK2 ubiquitin family protein 0.03 OrthoFinder output from all 47 species
Adi_g057053 DSK2 ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.03 OrthoFinder output from all 47 species
Adi_g057055 DSK2 ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.04 OrthoFinder output from all 47 species
Adi_g117313 DSK2 ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.02 OrthoFinder output from all 47 species
Adi_g117315 DSK2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07227 No alias ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g11958 DSK2 ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01003843001 DSK2 Ubiquitin domain-containing protein DSK2b OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01023890001 DSK2 Ubiquitin domain-containing protein DSK2b OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01023891001 DSK2 Ubiquitin domain-containing protein DSK2b OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Mp1g23030.1 DSK2 autophagic adaptor protein (DSK2) 0.03 OrthoFinder output from all 47 species
Pir_g00593 No alias ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g19195 DSK2 ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.03 OrthoFinder output from all 47 species
Solyc02g082800.3.1 DSK2, Solyc02g082800 autophagic adaptor protein (DSK2) 0.02 OrthoFinder output from all 47 species
Solyc03g032160.3.1 DSK2, Solyc03g032160 autophagic adaptor protein (DSK2) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0042393 histone binding IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 13 80
IPR015940 UBA 471 504
No external refs found!