Sam_g52225

Description : BEL-type transcription factor & original description: none

Gene families : OG0000268 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000268_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g52225
Cluster	HCCA: Cluster_135

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00262320	BLH2, SAW1,...	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
AMTR_s00059p00164750	BLH2, SAW1,...	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
AT1G75430	BLH11	BEL1-like homeodomain 11	0.02	OrthoFinder output from all 47 species
AT2G16400	BLH7	BEL1-like homeodomain 7	0.02	OrthoFinder output from all 47 species
Adi_g017108	BEL10, BLH10	BEL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g07301	EDA29, BLH1	BEL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os03g03260.1	BLH2, SAW1,...	transcription factor (BEL)	0.03	OrthoFinder output from all 47 species
Ore_g20122	BLH2, SAW1	BEL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g34160	BEL10, BLH10	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g35189	BLH2, SAW1	BEL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e019280_P001	VAN, BLH9, RPL,...	transcription factor (BEL)	0.02	OrthoFinder output from all 47 species
Zm00001e029812_P001	BEL1, Zm00001e029812	transcription factor (BEL)	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
MF	GO:0015035	protein-disulfide reductase activity	IEP	HCCA
MF	GO:0015036	disulfide oxidoreductase activity	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008422	Homeobox_KN_domain	620	659
IPR006563	POX_dom	385	553

External Links

No external refs found!