Sam_g52223


Description : subfamily ABCB transporter & original description: none


Gene families : OG0002075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002075_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g52223
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Ala_g37799 ATM2, ATATM2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04645 ATATM3, STA1, ATM3 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.26G039000.1 ATATM1, ATM1,... transport protein ATM of mitochondrial ISC system export... 0.02 OrthoFinder output from all 47 species
Msp_g14477 ATATM1, ATM1 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17300 ATATM3, STA1, ATM3 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015317 ATATM1, ATM1 subfamily ABCB transporter & original description: CDS=168-2231 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 3 275
IPR003439 ABC_transporter-like_ATP-bd 337 486
No external refs found!