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  5. Sam_g52137

Sam_g52137


Description : component *(ALB3) of thylakoid membrane SRP insertion system & original description: none


Gene families : OG0002587 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002587_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g52137

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00154880 ALB3,... Protein translocation.chloroplast.thylakoid membrane SRP... 0.08 OrthoFinder output from all 47 species
AT2G28800 ALB3 63 kDa inner membrane family protein 0.03 OrthoFinder output from all 47 species
Adi_g075484 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.04 OrthoFinder output from all 47 species
Adi_g085733 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.04 OrthoFinder output from all 47 species
Aev_g07201 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.06 OrthoFinder output from all 47 species
Aev_g39135 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.06 OrthoFinder output from all 47 species
Ala_g26449 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.04 OrthoFinder output from all 47 species
Als_g23935 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.07 OrthoFinder output from all 47 species
Aob_g05857 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.03 OrthoFinder output from all 47 species
Aob_g17905 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.06 OrthoFinder output from all 47 species
Aop_g05143 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.1 OrthoFinder output from all 47 species
Aop_g30639 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.09 OrthoFinder output from all 47 species
Aspi01Gene10915.t1 ALB3, Aspi01Gene10915 component *(ALB3) of thylakoid membrane SRP insertion... 0.05 OrthoFinder output from all 47 species
Aspi01Gene72637.t1 ALB3, Aspi01Gene72637 component *(ALB3) of thylakoid membrane SRP insertion... 0.05 OrthoFinder output from all 47 species
Azfi_s0237.g059593 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.03 OrthoFinder output from all 47 species
Azfi_s0385.g067545 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.03 OrthoFinder output from all 47 species
Cba_g35227 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.06 OrthoFinder output from all 47 species
Ceric.10G050200.1 ALB3, Ceric.10G050200 component *(ALB3) of thylakoid membrane SRP insertion... 0.04 OrthoFinder output from all 47 species
Ceric.26G029600.1 ALB3, Ceric.26G029600 component *(ALB3) of thylakoid membrane SRP insertion... 0.08 OrthoFinder output from all 47 species
Cre06.g251900 ALB3 Protein translocation.chloroplast.thylakoid membrane SRP... 0.02 OrthoFinder output from all 47 species
Cre17.g729800 ALB3 Protein translocation.chloroplast.thylakoid membrane SRP... 0.02 OrthoFinder output from all 47 species
Dac_g11976 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.03 OrthoFinder output from all 47 species
Dac_g38608 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.02 OrthoFinder output from all 47 species
Dcu_g03892 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.05 OrthoFinder output from all 47 species
Dde_g49445 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.04 OrthoFinder output from all 47 species
Ehy_g15625 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.04 OrthoFinder output from all 47 species
GSVIVT01024995001 ALB3 Protein translocation.chloroplast.thylakoid membrane SRP... 0.05 OrthoFinder output from all 47 species
LOC_Os01g05800.1 ALB3, LOC_Os01g05800 component ALB3 of thylakoid membrane SRP insertion system 0.08 OrthoFinder output from all 47 species
Len_g07539 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.05 OrthoFinder output from all 47 species
Lfl_g06530 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.03 OrthoFinder output from all 47 species
Lfl_g08005 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.06 OrthoFinder output from all 47 species
MA_10429913g0010 ALB3 Inner membrane protein PPF-1, chloroplastic OS=Pisum... 0.04 OrthoFinder output from all 47 species
MA_636661g0010 ALB4, ARTEMIS component ALB3 of thylakoid membrane SRP insertion system 0.02 OrthoFinder output from all 47 species
Mp2g08730.1 ALB3 component ALB3 of thylakoid membrane SRP insertion system 0.02 OrthoFinder output from all 47 species
Msp_g12322 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.09 OrthoFinder output from all 47 species
Msp_g42780 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.04 OrthoFinder output from all 47 species
Nbi_g11514 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.06 OrthoFinder output from all 47 species
Nbi_g25148 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.02 OrthoFinder output from all 47 species
Ore_g36182 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.05 OrthoFinder output from all 47 species
Pir_g09644 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.05 OrthoFinder output from all 47 species
Pir_g15782 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.03 OrthoFinder output from all 47 species
Pnu_g06204 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.03 OrthoFinder output from all 47 species
Ppi_g22199 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0237.g026569 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.02 OrthoFinder output from all 47 species
Solyc05g014050.3.1 ALB4, ARTEMIS,... component ALB3 of thylakoid membrane SRP insertion system 0.03 OrthoFinder output from all 47 species
Solyc11g066110.2.1 ALB3, Solyc11g066110 component ALB3 of thylakoid membrane SRP insertion system 0.06 OrthoFinder output from all 47 species
Spa_g05569 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.04 OrthoFinder output from all 47 species
Spa_g38469 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.07 OrthoFinder output from all 47 species
Spa_g55081 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.06 OrthoFinder output from all 47 species
Tin_g05082 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.03 OrthoFinder output from all 47 species
Tin_g43472 ALB3 component *(ALB3) of thylakoid membrane SRP insertion... 0.07 OrthoFinder output from all 47 species
Zm00001e016906_P001 ALB3, Zm00001e016906 component ALB3 of thylakoid membrane SRP insertion system 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0032977 membrane insertase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001708 YidC/ALB3/OXA1/COX18 176 390
No external refs found!