Sam_g51936


Description : nuclear-encoded organellar RNA polymerase *(NEP) & original description: none


Gene families : OG0002420 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002420_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g51936

Target Alias Description ECC score Gene Family Method Actions
AT2G24120 PDE319, SCA3 DNA/RNA polymerases superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G15700 No alias DNA/RNA polymerases superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g073918 MGP3 nuclear-encoded organellar RNA polymerase *(NEP) &... 0.03 OrthoFinder output from all 47 species
Ala_g02658 No alias nuclear-encoded organellar RNA polymerase *(NEP) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene14809.t2 PDE319, SCA3,... nuclear-encoded organellar RNA polymerase *(NEP) &... 0.04 OrthoFinder output from all 47 species
Azfi_s0032.g024782 No alias nuclear-encoded organellar RNA polymerase *(NEP) &... 0.04 OrthoFinder output from all 47 species
Azfi_s2184.g109817 No alias not classified & original description: CDS=103-942 0.03 OrthoFinder output from all 47 species
Ceric.05G056000.1 Ceric.05G056000 nuclear-encoded organellar RNA polymerase *(NEP) &... 0.05 OrthoFinder output from all 47 species
Dde_g12005 No alias nuclear-encoded organellar RNA polymerase *(NEP) &... 0.02 OrthoFinder output from all 47 species
Ehy_g14002 No alias nuclear-encoded organellar RNA polymerase *(NEP) &... 0.03 OrthoFinder output from all 47 species
Mp3g02090.1 No alias nuclear-encoded organellar RNA polymerase (NEP) 0.01 OrthoFinder output from all 47 species
Ore_g19690 MGP3 nuclear-encoded organellar RNA polymerase *(NEP) &... 0.02 OrthoFinder output from all 47 species
Ore_g43034 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011471 No alias nuclear-encoded organellar RNA polymerase *(NEP) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012306 No alias nuclear-encoded organellar RNA polymerase *(NEP) &... 0.05 OrthoFinder output from all 47 species
Sam_g16227 No alias nuclear-encoded organellar RNA polymerase *(NEP) &... 0.03 OrthoFinder output from all 47 species
Spa_g10286 No alias nuclear-encoded organellar RNA polymerase *(NEP) &... 0.04 OrthoFinder output from all 47 species
Tin_g26905 No alias nuclear-encoded organellar RNA polymerase *(NEP) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA

No InterPro domains available for this sequence

No external refs found!