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  5. Sam_g51385

Sam_g51385


Description : HUA2-type transcription factor & original description: none


Gene families : OG0001723 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001723_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g51385
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00079800 HUA2,... RNA biosynthesis.transcriptional activation.HUA2... 0.05 OrthoFinder output from all 47 species
AT2G48160 No alias Tudor/PWWP/MBT domain-containing protein 0.02 OrthoFinder output from all 47 species
AT3G63070 No alias Tudor/PWWP/MBT domain-containing protein 0.05 OrthoFinder output from all 47 species
AT5G23150 HUA2 Tudor/PWWP/MBT domain-containing protein 0.06 OrthoFinder output from all 47 species
Adi_g055484 HUA2 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g086266 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113316 HUA2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11061 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12546 HUA2 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g15874 HUA2 HUA2-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g29120 HUA2 HUA2-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g42142 HUA2 HUA2-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17265 HUA2 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20186 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009802 HUA2 HUA2-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Azfi_s0032.g024616 HUA2 HUA2-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0048.g030472 HUA2 HUA2-type transcription factor & original description: CDS=1-4200 0.02 OrthoFinder output from all 47 species
Azfi_s0119.g046734 HUA2 HUA2-type transcription factor & original description: CDS=1-4872 0.05 OrthoFinder output from all 47 species
Ceric.33G048700.1 HUA2, Ceric.33G048700 HUA2-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.36G034600.1 HUA2, Ceric.36G034600 HUA2-type transcription factor & original description:... 0.06 OrthoFinder output from all 47 species
Dcu_g14860 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10037 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21799 HUA2 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01011100001 No alias RNA biosynthesis.transcriptional activation.HUA2... 0.08 OrthoFinder output from all 47 species
GSVIVT01012049001 HUA2 RNA biosynthesis.transcriptional activation.HUA2... 0.06 OrthoFinder output from all 47 species
Gb_39860 HUA2 transcription factor (HUA2) 0.02 OrthoFinder output from all 47 species
LOC_Os03g24339.1 LOC_Os03g24339 transcription factor (HUA2) 0.03 OrthoFinder output from all 47 species
LOC_Os08g01054.2 HUA2, LOC_Os08g01054 transcription factor (HUA2) 0.03 OrthoFinder output from all 47 species
Len_g21971 HUA2 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Len_g53945 HUA2 HUA2-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Len_g54062 HUA2 HUA2-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g04290 HUA2 HUA2-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
MA_3338g0010 No alias transcription factor (HUA2) 0.05 OrthoFinder output from all 47 species
MA_6999g0010 No alias Protein HUA2-LIKE 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_9359526g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp8g15320.1 HUA2 transcription factor (HUA2) 0.03 OrthoFinder output from all 47 species
Msp_g27240 HUA2 HUA2-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g08516 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36625 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36626 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16391 HUA2 HUA2-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g13358 HUA2 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011426 HUA2 HUA2-type transcription factor & original description: CDS=5-4222 0.03 OrthoFinder output from all 47 species
Smo404055 HUA2 RNA biosynthesis.transcriptional activation.HUA2... 0.03 OrthoFinder output from all 47 species
Solyc02g014115.1.1 HUA2, Solyc02g014115 transcription factor (HUA2) 0.04 OrthoFinder output from all 47 species
Solyc02g014130.3.1 HUA2, Solyc02g014130 ENHANCER OF AG-4 protein 2 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc09g064840.4.1 Solyc09g064840 transcription factor (HUA2) 0.1 OrthoFinder output from all 47 species
Spa_g08440 HUA2 HUA2-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g10511 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11569 HUA2 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001720_P002 Zm00001e001720 transcription factor (HUA2) 0.03 OrthoFinder output from all 47 species
Zm00001e024276_P001 HUA2, Zm00001e024276 transcription factor (HUA2) 0.03 OrthoFinder output from all 47 species
Zm00001e029104_P001 HUA2, Zm00001e029104 transcription factor (HUA2) 0.04 OrthoFinder output from all 47 species
Zm00001e038169_P004 Zm00001e038169 transcription factor (HUA2) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006914 autophagy IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
CC GO:0070449 elongin complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990316 Atg1/ULK1 kinase complex IEP HCCA
InterPro domains Description Start Stop
IPR000313 PWWP_dom 22 103
IPR006569 CID_dom 686 806
No external refs found!