Sam_g51280

Description : villin actin-crosslinking factor & original description: none

Gene families : OG0000479 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000479_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g51280

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00025p00248490	ATVLN2, VLN2,...	Cytoskeleton.microfilament network.actin...	0.02	OrthoFinder output from all 47 species
Cba_g02237	VLN4, ATVLN4	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.33G042500.1	VLN4, ATVLN4,...	villin actin-crosslinking factor & original description:...	0.03	OrthoFinder output from all 47 species
GSVIVT01024752001	VLN1, ATVLN1	Cytoskeleton.microfilament network.actin...	0.03	OrthoFinder output from all 47 species
MA_10430359g0040	ATVLN3, VLN3	villin actin-crosslinking factor	0.03	OrthoFinder output from all 47 species
Zm00001e001712_P002	ATVLN2, VLN2,...	villin actin-crosslinking factor	0.02	OrthoFinder output from all 47 species
Zm00001e038175_P001	ATVLN2, VLN2,...	villin actin-crosslinking factor	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003779	actin binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	IEA	Interproscan
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
MF	GO:0043531	ADP binding	IEP	HCCA
MF	GO:0140359	ABC-type transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003128	Villin_headpiece	951	986
IPR007123	Gelsolin-like_dom	41	119
IPR007123	Gelsolin-like_dom	639	711
IPR007123	Gelsolin-like_dom	276	347
IPR007123	Gelsolin-like_dom	157	203

External Links

No external refs found!