Sam_g51100

Description : beta-type-3 component *(PBC) of 26S proteasome & original description: none

Gene families : OG0004036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004036_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g51100

Target	Alias	Description	ECC score	Gene Family Method
AT1G21720	PBC1	proteasome beta subunit C1	0.03	OrthoFinder output from all 47 species
Aev_g00417	PBC1	beta-type-3 component *(PBC) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
Ala_g14389	PBC2	beta-type-3 component *(PBC) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Aob_g01174	PBC1	beta-type-3 component *(PBC) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Aop_g00275	PBC1	beta-type-3 component *(PBC) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Cba_g26177	PBC1	beta-type-3 component *(PBC) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Ceric.13G038700.1	PBC1, Ceric.13G038700	beta-type-3 component *(PBC) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
Cre06.g267500	PBC1	Protein degradation.26S proteasome.20S core...	0.03	OrthoFinder output from all 47 species
Dcu_g35364	PBC1	beta-type-3 component *(PBC) of 26S proteasome &...	0.05	OrthoFinder output from all 47 species
GSVIVT01008836001	PBC1	Protein degradation.26S proteasome.20S core...	0.04	OrthoFinder output from all 47 species
Len_g24778	PBC2	beta-type-3 component *(PBC) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
Solyc04g009410.3.1	PBC1, Solyc04g009410	component beta type-3 of 26S proteasome	0.04	OrthoFinder output from all 47 species
Zm00001e030465_P001	PBC1, Zm00001e030465	component beta type-3 of 26S proteasome	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005839	proteasome core complex	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0040008	regulation of growth	IEP	HCCA
BP	GO:0045927	positive regulation of growth	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001353	Proteasome_sua/b	7	102

External Links

No external refs found!