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  5. Sam_g50851

Sam_g50851


Description : component *(IES2) of INO80 chromatin remodeling complex & original description: none


Gene families : OG0002110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002110_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g50851

Target Alias Description ECC score Gene Family Method Actions
AT1G56460 No alias HIT zinc finger ;PAPA-1-like conserved region 0.02 OrthoFinder output from all 47 species
Adi_g014880 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.04 OrthoFinder output from all 47 species
Adi_g093987 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.02 OrthoFinder output from all 47 species
Aspi01Gene54926.t1 Aspi01Gene54926 component *(IES2) of INO80 chromatin remodeling complex... 0.02 OrthoFinder output from all 47 species
Ceric.09G007600.1 Ceric.09G007600 component *(IES2) of INO80 chromatin remodeling complex... 0.02 OrthoFinder output from all 47 species
GSVIVT01031244001 TPR5 RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.03 OrthoFinder output from all 47 species
MA_10427476g0010 No alias component IES2 of INO80 chromatin remodeling complex 0.02 OrthoFinder output from all 47 species
MA_29452g0010 No alias component IES2 of INO80 chromatin remodeling complex 0.02 OrthoFinder output from all 47 species
Ore_g31574 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0031011 Ino80 complex IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR007529 Znf_HIT 670 700
IPR006880 INO80B_C 569 653
No external refs found!