Sam_g50726


Description : STIG1/GRI precursor polypeptide & original description: none


Gene families : OG0000572 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000572_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g50726

Target Alias Description ECC score Gene Family Method Actions
AT2G18360 No alias alpha/beta-Hydrolases superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G09430 No alias alpha/beta-Hydrolases superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g105660 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25876.t1 Aspi01Gene25876 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25876.t2 Aspi01Gene25876 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47294.t1 Aspi01Gene47294 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0075.g037625 No alias not classified & original description: CDS=84-1271 0.03 OrthoFinder output from all 47 species
Ceric.13G021400.1 Ceric.13G021400 not classified & original description: pacid=50636343... 0.02 OrthoFinder output from all 47 species
Dcu_g40594 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g16876 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g28763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_03307 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_04818 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g07420.1 LOC_Os01g07420 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g47780.1 LOC_Os02g47780 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g08100.1 LOC_Os03g08100 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g35156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10425881g0040 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_181g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_478906g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g06240.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp4g08910.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp5g17800.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g06095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09100 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27818 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g37708 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03203 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000573_P001 Zm00001e000573 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e001875_P001 Zm00001e001875 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e015594_P002 Zm00001e015594 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e020374_P001 Zm00001e020374 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e025866_P002 Zm00001e025866 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR006969 Stig1 3 52
IPR000073 AB_hydrolase_1 112 346
No external refs found!