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  5. Sam_g50701

Sam_g50701


Description : guanine nucleotide dissociation inhibitor *(RopGDI) & original description: none


Gene families : OG0001513 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001513_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g50701

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00174290 SCN1,... Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
Ala_g16981 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species
Ala_g20693 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.03 OrthoFinder output from all 47 species
Als_g00548 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.03 OrthoFinder output from all 47 species
Als_g05419 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.03 OrthoFinder output from all 47 species
Als_g15235 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.03 OrthoFinder output from all 47 species
Aop_g08108 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene00793.t1 SCN1, Aspi01Gene00793 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene04303.t1 SCN1, Aspi01Gene04303 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.03 OrthoFinder output from all 47 species
Cba_g15388 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.03 OrthoFinder output from all 47 species
Ceric.31G032800.1 SCN1, Ceric.31G032800 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species
Dac_g07239 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species
Ehy_g04328 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.04 OrthoFinder output from all 47 species
Ehy_g30888 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.04 OrthoFinder output from all 47 species
GSVIVT01031620001 SCN1 Multi-process regulation.Rop GTPase regulatory... 0.02 OrthoFinder output from all 47 species
LOC_Os01g68540.1 SCN1, LOC_Os01g68540 guanine nucleotide dissociation inhibitor (RopGDI) 0.02 OrthoFinder output from all 47 species
LOC_Os02g48730.1 SCN1, LOC_Os02g48730 guanine nucleotide dissociation inhibitor (RopGDI) 0.02 OrthoFinder output from all 47 species
Lfl_g19948 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.03 OrthoFinder output from all 47 species
Lfl_g37795 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species
Lfl_g38013 No alias guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.05 OrthoFinder output from all 47 species
MA_205752g0010 SCN1 guanine nucleotide dissociation inhibitor (RopGDI) 0.02 OrthoFinder output from all 47 species
MA_4026g0010 No alias guanine nucleotide dissociation inhibitor (RopGDI) 0.03 OrthoFinder output from all 47 species
MA_9483417g0010 No alias guanine nucleotide dissociation inhibitor (RopGDI) 0.03 OrthoFinder output from all 47 species
Msp_g21563 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species
Ppi_g05008 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011233 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0155.g023612 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.04 OrthoFinder output from all 47 species
Sam_g08474 No alias guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.04 OrthoFinder output from all 47 species
Spa_g09684 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.04 OrthoFinder output from all 47 species
Tin_g26735 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species
Tin_g28325 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0007266 Rho protein signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000406 Rho_GDI 163 349
No external refs found!