Sam_g50687

Description : not classified & original description: none

Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g50687

Target	Alias	Description	ECC score	Gene Family Method
Als_g11443	ATMBD6, MBD6	methylation reader *(MBD5-6) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g15671	No alias	methylation reader *(MBD5-6) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g26138	MBD05, MBD5, ATMBD5	methylation reader *(MBD5-6) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g04582	MBD05, MBD5, ATMBD5	methylation reader *(MBD5-6) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g61579	MBD05, MBD5, ATMBD5	methylation reader *(MBD5-6) & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g09713	MBD05, MBD5, ATMBD5	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g10163	No alias	methylation reader *(MBD5-6) & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g18783	MBD05, MBD5, ATMBD5	methylation reader *(MBD5-6) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g42606	MBD05, MBD5, ATMBD5	methylation reader *(MBD5-6) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015792	MBD05, MBD5, ATMBD5	methylation reader *(MBD5-6) & original description: CDS=471-2042	0.02	OrthoFinder output from all 47 species
Tin_g02100	No alias	methylation reader *(MBD5-6) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001739	Methyl_CpG_DNA-bd	2	45

External Links

No external refs found!