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  5. Sam_g50625

Sam_g50625


Description : translation initiation factor *(IF-2) & original description: none


Gene families : OG0001742 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001742_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g50625

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene03760.t1 FUG1, Aspi01Gene03760 translation initiation factor *(IF-2) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene54284.t1 Aspi01Gene54284 translation initiation factor *(IF-2) & original... 0.03 OrthoFinder output from all 47 species
Cba_g22967 No alias translation initiation factor *(IF-2) & original... 0.02 OrthoFinder output from all 47 species
Dac_g04706 No alias translation initiation factor *(IF-2) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006751 glutathione catabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016842 amidine-lyase activity IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0042219 cellular modified amino acid catabolic process IEP HCCA
BP GO:0043171 peptide catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044273 sulfur compound catabolic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR023115 TIF_IF2_dom3 70 182
No external refs found!