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  5. Sam_g50621

Sam_g50621


Description : regulatory protein *(SOQ1) of non-photochemical quenching & original description: none


Gene families : OG0003626 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003626_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g50621

Target Alias Description ECC score Gene Family Method Actions
AT1G56500 No alias haloacid dehalogenase-like hydrolase family protein 0.03 OrthoFinder output from all 47 species
Aev_g14013 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09026 No alias regulatory protein *(SOQ1) of non-photochemical... 0.02 OrthoFinder output from all 47 species
Aspi01Gene46305.t1 Aspi01Gene46305 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46221 No alias regulatory protein *(SOQ1) of non-photochemical... 0.02 OrthoFinder output from all 47 species
Dde_g18494 No alias regulatory protein *(SOQ1) of non-photochemical... 0.03 OrthoFinder output from all 47 species
Ehy_g18146 No alias regulatory protein *(SOQ1) of non-photochemical... 0.05 OrthoFinder output from all 47 species
Gb_14671 No alias SOQ1 non-photochemical quenching regulator protein 0.02 OrthoFinder output from all 47 species
LOC_Os03g19760.1 LOC_Os03g19760 SOQ1 non-photochemical quenching regulator protein 0.04 OrthoFinder output from all 47 species
Len_g47037 No alias regulatory protein *(SOQ1) of non-photochemical... 0.02 OrthoFinder output from all 47 species
Lfl_g10265 No alias regulatory protein *(SOQ1) of non-photochemical... 0.04 OrthoFinder output from all 47 species
Mp5g22510.1 No alias SOQ1 non-photochemical quenching regulator protein 0.02 OrthoFinder output from all 47 species
Msp_g13160 No alias regulatory protein *(SOQ1) of non-photochemical... 0.02 OrthoFinder output from all 47 species
Ore_g09927 No alias regulatory protein *(SOQ1) of non-photochemical... 0.04 OrthoFinder output from all 47 species
Pir_g20017 No alias regulatory protein *(SOQ1) of non-photochemical... 0.03 OrthoFinder output from all 47 species
Pnu_g14012 No alias regulatory protein *(SOQ1) of non-photochemical... 0.03 OrthoFinder output from all 47 species
Solyc01g100650.3.1 Solyc01g100650 SOQ1 non-photochemical quenching regulator protein 0.04 OrthoFinder output from all 47 species
Zm00001e001473_P001 Zm00001e001473 SOQ1 non-photochemical quenching regulator protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0043167 ion binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR012336 Thioredoxin-like_fold 429 524
IPR041492 HAD_2 81 264
IPR001258 NHL_repeat 812 837
IPR001258 NHL_repeat 632 657
No external refs found!