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  5. Sam_g50560

Sam_g50560


Description : not classified & original description: none


Gene families : OG0000707 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000707_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g50560

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001085.6 GLU2 Ferredoxin-dependent glutamate synthase, chloroplastic... 0.02 OrthoFinder output from all 47 species
Ehy_g05115 GLT1 EC_1.4 oxidoreductase acting on CH-NH2 group of donor &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000297 GLT1 EC_1.4 oxidoreductase acting on CH-NH2 group of donor &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0231.g026431 GLU1, FD-GOGAT,... EC_1.4 oxidoreductase acting on CH-NH2 group of donor &... 0.03 OrthoFinder output from all 47 species
Sam_g08968 No alias EC_1.4 oxidoreductase acting on CH-NH2 group of donor &... 0.03 OrthoFinder output from all 47 species
Sam_g27601 No alias EC_1.4 oxidoreductase acting on CH-NH2 group of donor &... 0.04 OrthoFinder output from all 47 species
Zm00001e021120_P001 Zm00001e021120 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
BP GO:0016255 attachment of GPI anchor to protein IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0032266 phosphatidylinositol-3-phosphate binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR002489 Glu_synth_asu_C 99 160
No external refs found!