Sam_g50176


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g50176
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00064890 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g21065... 0.02 OrthoFinder output from all 47 species
Aev_g21568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12481 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05908 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07446 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22581 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03830 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08519 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20440 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07941.t1 LPA66, Aspi01Gene07941 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17591.t1 Aspi01Gene17591 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene63595.t1 EMB2261, Aspi01Gene63595 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0084.g039082 No alias not classified & original description: CDS=1-2637 0.02 OrthoFinder output from all 47 species
Azfi_s0245.g060017 No alias not classified & original description: CDS=1-2076 0.03 OrthoFinder output from all 47 species
Cba_g29359 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G079500.1 Ceric.05G079500 not classified & original description: pacid=50579193... 0.03 OrthoFinder output from all 47 species
Ceric.10G013000.1 EMB2758, Ceric.10G013000 not classified & original description: pacid=50613337... 0.03 OrthoFinder output from all 47 species
Ceric.11G041000.1 Ceric.11G041000 not classified & original description: pacid=50594870... 0.02 OrthoFinder output from all 47 species
Ceric.18G077100.1 Ceric.18G077100 not classified & original description: pacid=50621411... 0.03 OrthoFinder output from all 47 species
Ceric.19G000700.1 VAC1, ECB2,... not classified & original description: pacid=50576122... 0.03 OrthoFinder output from all 47 species
Ceric.30G022200.1 Ceric.30G022200 not classified & original description: pacid=50608388... 0.03 OrthoFinder output from all 47 species
Dac_g05194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16461 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15341 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003766001 LPA66 Pentatricopeptide repeat-containing protein At1g08070,... 0.02 OrthoFinder output from all 47 species
LOC_Os11g45410.1 LOC_Os11g45410 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Len_g02887 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17794 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18543 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g22097 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g26486 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g26581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g47762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54668 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54934 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g03860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g27923 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42801 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04708 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25436 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26038 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01374 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12989 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13279 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60411 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63519 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09076 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g35387 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013713 EMB2758 not classified & original description: CDS=1-1941 0.02 OrthoFinder output from all 47 species
Sam_g05175 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07135 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g19471 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24177 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28003 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18014 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g20190 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g23704 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g28910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49909 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 158 185
IPR002885 Pentatricopeptide_repeat 65 92
IPR002885 Pentatricopeptide_repeat 93 123
IPR002885 Pentatricopeptide_repeat 129 151
No external refs found!