Sam_g50117


Description : not classified & original description: none


Gene families : OG0000034 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g50117

Target Alias Description ECC score Gene Family Method Actions
Ala_g08044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20514 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g32289 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g38093 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g70817 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene01424.t1 Aspi01Gene01424 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02161.t1 Aspi01Gene02161 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18624.t1 Aspi01Gene18624 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40781.t1 PIP5K9, Aspi01Gene40781 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Aspi01Gene43285.t2 Aspi01Gene43285 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50478.t1 Aspi01Gene50478 metallothionein *(MT) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12787 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20550 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g21796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g23689 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g32333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g17932 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g21161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g21286 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g30657 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10848 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g25106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18986 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g31155 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g48499 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g23922 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g24654 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g31571 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g50452 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g01426 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g38213 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g40095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02926 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g07517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14478 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60195 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001357 No alias not classified & original description: CDS=1-645 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002067 No alias not classified & original description: CDS=1-666 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004101 No alias not classified & original description: CDS=1-705 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004102 No alias not classified & original description: CDS=1-732 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004886 No alias not classified & original description: CDS=71-334 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005710 No alias not classified & original description: CDS=1-1596 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0081.g017986 No alias not classified & original description: CDS=1-570 0.02 OrthoFinder output from all 47 species
Sam_g00729 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13167 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g21970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35866 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29723 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g29806 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g39723 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!