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  5. Sam_g50032

Sam_g50032


Description : component *(RPA1) of RPA presynaptic filament assembly factor complex & original description: none


Gene families : OG0002229 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002229_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g50032

Target Alias Description ECC score Gene Family Method Actions
Dde_g30616 ATRPA70A, RPA1A,... component *(RPA1) of RPA presynaptic filament assembly... 0.03 OrthoFinder output from all 47 species
Lfl_g03267 ATRPA70A, RPA1A,... component *(RPA1) of RPA presynaptic filament assembly... 0.02 OrthoFinder output from all 47 species
Smo441216 ATRPA70A, RPA1A,... Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.04 OrthoFinder output from all 47 species
Solyc05g025590.4.1 ATRPA70A, RPA1A,... component RPA1 of single-stranded-DNA binding RPA... 0.01 OrthoFinder output from all 47 species
Solyc08g075840.3.1 Solyc08g075840 component RPA1 of single-stranded-DNA binding RPA... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR007199 Rep_factor-A_N 8 100
IPR013955 Rep_factor-A_C 488 637
IPR004365 NA-bd_OB_tRNA 217 289
IPR031657 REPA_OB_2 327 431
No external refs found!