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  5. Sam_g50011

Sam_g50011


Description : not classified & original description: none


Gene families : OG0000490 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000490_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g50011
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
Aop_g11227 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02837.t1 Aspi01Gene02837 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19968 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g44164 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_26217 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_30355 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g39509 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g05225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g46203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!