Sam_g49996


Description : mitochondrial RNA pseudouridine synthase *(PUS3/4) & original description: none


Gene families : OG0004272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004272_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g49996
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
Ceric.12G051200.1 Ceric.12G051200 mitochondrial RNA pseudouridine synthase *(PUS3/4) &... 0.03 OrthoFinder output from all 47 species
Gb_32577 No alias dual-specificity tRNA/rRNA pseudouridine synthase (RluA) 0.03 OrthoFinder output from all 47 species
Mp2g19020.1 No alias dual-specificity tRNA/rRNA pseudouridine synthase (RluA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0009451 RNA modification IEA Interproscan
MF GO:0009982 pseudouridine synthase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR006145 PsdUridine_synth_RsuA/RluA 169 343
No external refs found!