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  5. Sam_g49748

Sam_g49748


Description : not classified & original description: none


Gene families : OG0001413 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001413_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g49748

Target Alias Description ECC score Gene Family Method Actions
Als_g04479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14808 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g15629 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03965 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_3965g0010 No alias C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Mp7g12340.1 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Nbi_g02432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g025440.3.1 Solyc03g025440 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Spa_g47902 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004834 tryptophan synthase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008484 sulfuric ester hydrolase activity IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!