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  5. Sam_g49587

Sam_g49587


Description : not classified & original description: none


Gene families : OG0009408 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009408_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g49587

Target Alias Description ECC score Gene Family Method Actions
Sam_g13986 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g24673 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g35610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35615 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g38743 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g39885 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g44908 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Sam_g49613 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1905354 exoribonuclease complex IEP HCCA
InterPro domains Description Start Stop
IPR025724 GAG-pre-integrase_dom 167 240
No external refs found!