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  5. Sam_g49509

Sam_g49509


Description : EC_2.2 transferase transferring aldehyde or ketonic group & original description: none


Gene families : OG0012364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012364_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g49509

Target Alias Description ECC score Gene Family Method Actions
Adi_g107982 CLA, DXS, CLA1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18361 CLA, DXS, CLA1,... 1-deoxy-D-xylulose 5-phosphate synthase *(DXS) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR033248 Transketolase_C 152 275
IPR005475 Transketolase-like_Pyr-bd 2 134
No external refs found!