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  5. Sam_g49420

Sam_g49420


Description : small subunit sigma of AP-3 Golgi to vacuole cargo adaptor complex & original description: none


Gene families : OG0004438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g49420

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0343.g065719 AP19 small subunit sigma of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Ceric.15G038200.1 AP19, Ceric.15G038200 small subunit sigma of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
Cre09.g394100 AP19 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.01 OrthoFinder output from all 47 species
LOC_Os03g57040.1 AP19, LOC_Os03g57040 small subunit sigma of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
Msp_g27376 AP19 small subunit sigma of AP-3 Golgi to vacuole cargo... 0.04 OrthoFinder output from all 47 species
Solyc11g005220.2.1 Solyc11g005220 small subunit sigma of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004017 adenylate kinase activity IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
MF GO:0050145 nucleoside monophosphate kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 19 158
No external refs found!