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  5. Sam_g49308

Sam_g49308


Description : not classified & original description: none


Gene families : OG0000585 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000585_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g49308
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00189440 VSR6, VSR3;3,... Vesicle trafficking.endomembrane trafficking.vacuolar... 0.03 OrthoFinder output from all 47 species
AT2G34940 VSR5, VSR3;2, BP80-3;2 VACUOLAR SORTING RECEPTOR 5 0.02 OrthoFinder output from all 47 species
AT4G20110 VSR7, BP80-3;1, VSR3;1 VACUOLAR SORTING RECEPTOR 7 0.02 OrthoFinder output from all 47 species
Adi_g051957 VSR4, VSR2;1,... lytic vacuole protein sorting receptor *(VSR) & original... 0.02 OrthoFinder output from all 47 species
Als_g05625 VSR2;2, ATVSR3,... lytic vacuole protein sorting receptor *(VSR) & original... 0.02 OrthoFinder output from all 47 species
Cba_g07669 VSR4, VSR2;1,... lytic vacuole protein sorting receptor *(VSR) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os03g21720.1 AtVSR2,... vacuolar sorting receptor (VSR) 0.02 OrthoFinder output from all 47 species
LOC_Os04g52190.1 VSR6, VSR3;3,... vacuolar sorting receptor (VSR) 0.02 OrthoFinder output from all 47 species
MA_491657g0010 VSR2;2, ATVSR3,... Vacuolar-sorting receptor 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp7g13540.1 VSR4, VSR2;1,... vacuolar sorting receptor (VSR) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
InterPro domains Description Start Stop
IPR003137 PA_domain 72 163
No external refs found!