Sam_g49102

Description : not classified & original description: none

Gene families : OG0006517 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006517_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g49102
Cluster	HCCA: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00133p00054340	evm_27.TU.AmTr_v1...	PsbP domain-containing protein 3, chloroplastic...	0.03	OrthoFinder output from all 47 species
Ala_g08526	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.16G011400.1	Ceric.16G011400	not classified & original description: pacid=50589110...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021682.6	No alias	No description available	0.02	OrthoFinder output from all 47 species
Lfl_g05889	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g06533	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0227.g026375	No alias	not classified & original description: CDS=59-778	0.02	OrthoFinder output from all 47 species
Smo448162	No alias	PsbP domain-containing protein 3, chloroplastic...	0.05	OrthoFinder output from all 47 species
Spa_g24667	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	IEA	Interproscan
CC	GO:0009654	photosystem II oxygen evolving complex	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	IEA	Interproscan
CC	GO:0019898	extrinsic component of membrane	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0006720	isoprenoid metabolic process	IEP	HCCA
BP	GO:0008299	isoprenoid biosynthetic process	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
BP	GO:0010257	NADH dehydrogenase complex assembly	IEP	HCCA
BP	GO:0010258	NADH dehydrogenase complex (plastoquinone) assembly	IEP	HCCA
BP	GO:0010275	NAD(P)H dehydrogenase complex assembly	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
MF	GO:0140359	ABC-type transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002683	PsbP_C	111	269

External Links

No external refs found!