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  5. Sam_g48945

Sam_g48945


Description : not classified & original description: none


Gene families : OG0005859 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005859_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g48945

Target Alias Description ECC score Gene Family Method Actions
Aev_g28789 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013613001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01013622001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01021276001 No alias Probable LRR receptor-like serine/threonine-protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01021281001 No alias Probable LRR receptor-like serine/threonine-protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01021292001 No alias Probable LRR receptor-like serine/threonine-protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01021296001 No alias Probable LRR receptor-like serine/threonine-protein... 0.05 OrthoFinder output from all 47 species
GSVIVT01029729001 No alias Probable LRR receptor-like serine/threonine-protein... 0.03 OrthoFinder output from all 47 species
Gb_01989 No alias Probable leucine-rich repeat receptor-like... 0.03 OrthoFinder output from all 47 species
Gb_02001 No alias Probable leucine-rich repeat receptor-like... 0.06 OrthoFinder output from all 47 species
Gb_02003 No alias Probable LRR receptor-like serine/threonine-protein... 0.03 OrthoFinder output from all 47 species
Gb_02006 No alias Probable LRR receptor-like serine/threonine-protein... 0.03 OrthoFinder output from all 47 species
LOC_Os05g16420.1 LOC_Os05g16420 Probable LRR receptor-like serine/threonine-protein... 0.02 OrthoFinder output from all 47 species
LOC_Os05g16920.1 LOC_Os05g16920 Probable LRR receptor-like serine/threonine-protein... 0.02 OrthoFinder output from all 47 species
LOC_Os05g17800.1 LOC_Os05g17800 Probable LRR receptor-like serine/threonine-protein... 0.03 OrthoFinder output from all 47 species
MA_10426441g0010 No alias Probable LRR receptor-like serine/threonine-protein... 0.03 OrthoFinder output from all 47 species
MA_10435933g0010 FLS2 Probable LRR receptor-like serine/threonine-protein... 0.03 OrthoFinder output from all 47 species
MA_223275g0010 No alias Probable LRR receptor-like serine/threonine-protein... 0.03 OrthoFinder output from all 47 species
MA_7438g0010 No alias Probable LRR receptor-like serine/threonine-protein... 0.03 OrthoFinder output from all 47 species
Zm00001e006934_P003 Zm00001e006934 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 268 289
No external refs found!