1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g30252

Lfl_g30252


Description : not classified & original description: none


Gene families : OG0006545 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006545_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g30252

Target Alias Description ECC score Gene Family Method Actions
AT3G23020 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Aop_g05556 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.27G000500.1 Ceric.27G000500 not classified & original description: pacid=50606226... 0.02 OrthoFinder output from all 47 species
Dcu_g09918 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo77736 No alias Pentatricopeptide repeat-containing protein At3g23020... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 162 207
IPR002885 Pentatricopeptide_repeat 251 295
IPR002885 Pentatricopeptide_repeat 808 851
IPR033443 PPR_long 476 592
IPR002885 Pentatricopeptide_repeat 602 628
IPR002885 Pentatricopeptide_repeat 639 662
IPR002885 Pentatricopeptide_repeat 428 455
IPR002885 Pentatricopeptide_repeat 351 383
IPR002885 Pentatricopeptide_repeat 696 743
No external refs found!