Sam_g48836

Description : EC_6.4 ligase forming carbon-carbon bond & original description: none

Gene families : OG0001087 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001087_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g48836

Target	Alias	Description	ECC score	Gene Family Method
Ala_g10840	CAC2	EC_6.4 ligase forming carbon-carbon bond & original...	0.02	OrthoFinder output from all 47 species
Aop_g05185	CAC2	EC_6.4 ligase forming carbon-carbon bond & original...	0.02	OrthoFinder output from all 47 species
Dde_g03392	CAC2	EC_6.4 ligase forming carbon-carbon bond & original...	0.02	OrthoFinder output from all 47 species
Dde_g04846	CAC2	EC_6.4 ligase forming carbon-carbon bond & original...	0.02	OrthoFinder output from all 47 species
Ppi_g13611	CAC2	EC_6.4 ligase forming carbon-carbon bond & original...	0.02	OrthoFinder output from all 47 species
Solyc01g008330.4.1	CAC2, Solyc01g008330	biotin carboxylase subunit of polymeric acetyl-CoA...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0003839	gamma-glutamylcyclotransferase activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	HCCA
BP	GO:0006749	glutathione metabolic process	IEP	HCCA
BP	GO:0006751	glutathione catabolic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	HCCA
MF	GO:0016842	amidine-lyase activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
BP	GO:0042219	cellular modified amino acid catabolic process	IEP	HCCA
BP	GO:0043171	peptide catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044273	sulfur compound catabolic process	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005479	CbamoylP_synth_lsu-like_ATP-bd	209	416
IPR005482	Biotin_COase_C	430	536
IPR005481	BC-like_N	97	204

External Links

No external refs found!