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  5. Lfl_g30217

Lfl_g30217 (CSD1)


Aliases : CSD1

Description : EC_1.15 oxidoreductase acting on superoxide as acceptor & original description: none


Gene families : OG0000525 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000525_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g30217
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AT2G28190 CZSOD2, CSD2 copper/zinc superoxide dismutase 2 0.01 OrthoFinder output from all 47 species
Als_g38928 CSD1 EC_1.15 oxidoreductase acting on superoxide as acceptor... 0.03 OrthoFinder output from all 47 species
Ceric.13G061600.1 CSD1, Ceric.13G061600 EC_1.15 oxidoreductase acting on superoxide as acceptor... 0.05 OrthoFinder output from all 47 species
Dcu_g20830 CSD1 EC_1.15 oxidoreductase acting on superoxide as acceptor... 0.02 OrthoFinder output from all 47 species
Dcu_g29162 CSD1 EC_1.15 oxidoreductase acting on superoxide as acceptor... 0.03 OrthoFinder output from all 47 species
Ore_g08333 CSD1 EC_1.15 oxidoreductase acting on superoxide as acceptor... 0.02 OrthoFinder output from all 47 species
Pp3c24_4100V3.1 CSD1, Pp3c24_4100 copper/zinc superoxide dismutase 1 0.01 OrthoFinder output from all 47 species
Ppi_g06165 CSD1 EC_1.15 oxidoreductase acting on superoxide as acceptor... 0.02 OrthoFinder output from all 47 species
Ppi_g16128 CSD1 EC_1.15 oxidoreductase acting on superoxide as acceptor... 0.02 OrthoFinder output from all 47 species
Ppi_g19752 CSD1 EC_1.15 oxidoreductase acting on superoxide as acceptor... 0.03 OrthoFinder output from all 47 species
Solyc01g067740.3.1 CSD1, Solyc01g067740 copper/zinc superoxide dismutase 0.03 OrthoFinder output from all 47 species
Spa_g47350 CSD1 EC_1.15 oxidoreductase acting on superoxide as acceptor... 0.02 OrthoFinder output from all 47 species
Zm00001e000863_P001 CSD3, Zm00001e000863 copper/zinc superoxide dismutase 0.03 OrthoFinder output from all 47 species
Zm00001e035789_P002 CSD1, Zm00001e035789 copper/zinc superoxide dismutase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006801 superoxide metabolic process IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
CC GO:0005956 protein kinase CK2 complex IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001424 SOD_Cu_Zn_dom 15 149
No external refs found!