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  5. Sam_g48534

Sam_g48534


Description : EC_3.4 hydrolase acting on peptide bond (peptidase) & original description: none


Gene families : OG0000056 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g48534
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AT3G49340 No alias Cysteine proteinases superfamily protein 0.03 OrthoFinder output from all 47 species
Aob_g25593 CP1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Aob_g26901 XBCP3 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Aob_g32735 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Aop_g59840 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Dac_g03701 XCP1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
MA_126501g0010 No alias Oryzain beta chain OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Pir_g35665 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Sam_g32365 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.08 OrthoFinder output from all 47 species
Sam_g49869 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0008810 cellulase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009251 glucan catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030245 cellulose catabolic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044247 cellular polysaccharide catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044275 cellular carbohydrate catabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051275 beta-glucan catabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR013201 Prot_inhib_I29 50 110
IPR000668 Peptidase_C1A_C 140 352
No external refs found!