Sam_g48410

Description : not classified & original description: none

Gene families : OG0000111 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000111_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g48410

Target	Alias	Description	ECC score	Gene Family Method
Adi_g008046	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g020838	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g32067	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g25990	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g00199	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g57558	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene07397.t1	Aspi01Gene07397	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g06146	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g38568	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g51825	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g32237	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g00221	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g56615	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g00371	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Sam_g01326	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g08514	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Sam_g09349	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g18211	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Sam_g19328	No alias	not classified & original description: none	0.1	OrthoFinder output from all 47 species
Sam_g20867	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g21437	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Sam_g25599	No alias	not classified & original description: none	0.11	OrthoFinder output from all 47 species
Sam_g25700	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g27010	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g27690	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g30488	No alias	not classified & original description: none	0.11	OrthoFinder output from all 47 species
Sam_g37056	No alias	not classified & original description: none	0.12	OrthoFinder output from all 47 species
Sam_g39695	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g40458	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Sam_g40570	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g52765	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015074	DNA integration	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0006801	superoxide metabolic process	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
BP	GO:0072593	reactive oxygen species metabolic process	IEP	HCCA
MF	GO:0140359	ABC-type transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001584	Integrase_cat-core	47	145
IPR041588	Integrase_H2C2	1	33

External Links

No external refs found!

Sam_g48410

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation