1. Home
  2. Species
  3. Salvinia molesta
  4. Sequence
  5. Sam_g48404

Sam_g48404


Description : component *(eL28) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000910 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000910_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g48404

Target Alias Description ECC score Gene Family Method Actions
AT2G19730 No alias Ribosomal L28e protein family 0.03 OrthoFinder output from all 47 species
AT4G29410 No alias Ribosomal L28e protein family 0.03 OrthoFinder output from all 47 species
Aob_g37483 No alias component *(eL28) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Aob_g38996 No alias component *(eL28) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aop_g00977 No alias component *(eL28) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Cba_g20954 No alias component *(eL28) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ceric.25G035500.1 Ceric.25G035500 component *(eL28) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020710.93 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Cre11.g467578 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Dde_g41178 No alias component *(eL28) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
LOC_Os02g57540.1 LOC_Os02g57540 component RPL28 of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os05g46430.1 LOC_Os05g46430 component RPL28 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Ore_g39103 No alias component *(eL28) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pp3c14_10480V3.1 Pp3c14_10480 Ribosomal L28e protein family 0.03 OrthoFinder output from all 47 species
Pp3c17_14060V3.1 Pp3c17_14060 Ribosomal L28e protein family 0.02 OrthoFinder output from all 47 species
Pp3c2_6100V3.1 Pp3c2_6100 Ribosomal L28e protein family 0.01 OrthoFinder output from all 47 species
Solyc03g121330.3.1 Solyc03g121330 component RPL28 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Solyc06g062500.4.1 Solyc06g062500 component RPL28 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Solyc12g044720.2.1 Solyc12g044720 component RPL28 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e026410_P001 Zm00001e026410 component RPL28 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e032283_P002 Zm00001e032283 component RPL28 of LSU proteome component 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR029004 L28e/Mak16 13 127
No external refs found!